Got it working, but in my case, putting them all in the data folder didn't quite do the trick. I had to create a folder labeled "eyes" in the textures folder and put the texture files in that folder.
Place the Content from the Data Folder (textures folder and PortalEyes.esp) in C:\Program Files\Steam\SteamApps\common\skyrim\Data folder or if you have a 64bit system in C:\Program Files (x86)\Steam\SteamApps\common\skyrim\Data
Doesn't seem to be working for me. All I'm getting, in addition to the default eye colors, is 4 pairs of dark brown human eyes. Is there a specific folder that I'm supposed to put the files in?
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Nevertheless, the eyes look good. Endorsed.