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MATOR SMASH
Mator Smash generates conflict resolution patches similar to Wrye Bash, but covers more records. It's not an ideal tool, mainly because it doesn't support ESL format (so it doesn't support ESL flagged files).
It's still worth using to resolve conflicts. Remember that this tool is not ideal. You still need to check Smashed Patch manually in xEdit to make sure that everything looks good.
Unofficial Mator Smash Updated
INSTALLATION: Download Mator Smash Updated (Main Files) and then extract the contents to a new folder (name it Mator Smash) in your Modding Folder (Tools).
Add Mator Smash as a executable. You need to always run it via Mod Organizer!
SMASHED PATCH
Run SSEEdit via Mod Organizer. Load ALL your mods. When everything will load Right-click and select Apply Filter.
Tick ONLY these options. Click Filter.
Only "colored" mods needs to be smashed. Remember which ones have color - that information will be needed later.
Run Mator Smash via Mod Organizer. Select SSE profile.
Select only "colored" mods from previous steps. Click OK.
Make sure that everything had Smash.All setting.
Select all files. Right-click, Add to patch and then <New Patch>.
Name your patch and click ok.
Build patch (click third icon). Now you can close the program. You will find your newly created Smashed Patch in your overwrite folder. Zip it and install manually as any other mod.
Open your Smashed Patch.esp in SSEEdit. Expand Smashed Patch.esp. Remove EVERYTHING except Music Type.
Click Yes in Warning.
PRO TIP: Hold shift to select more than one record. You can also hold ctrl and then click on record.
At the end, flag the plugin as ESL.